Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab28Q99KL7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab28Q99KL7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab28Q99KL7 Gm9899-201ENSMUST00000065519 555 ntBASIC12.38□□□□□ -0.43
Rab28Q99KL7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab28Q99KL7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Rab28Q99KL7 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.38□□□□□ -0.43
Rab28Q99KL7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab28Q99KL7 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab28Q99KL7 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab28Q99KL7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab28Q99KL7 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.38□□□□□ -0.43
Rab28Q99KL7 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab28Q99KL7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab28Q99KL7 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab28Q99KL7 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab28Q99KL7 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Rab28Q99KL7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab28Q99KL7 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Mir1247-201ENSMUST00000116706 82 ntBASIC12.37□□□□□ -0.43
Rab28Q99KL7 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.37□□□□□ -0.43
Rab28Q99KL7 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Gm16296-201ENSMUST00000159905 325 ntBASIC12.37□□□□□ -0.43
Rab28Q99KL7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.37□□□□□ -0.43
Rab28Q99KL7 Gm42627-201ENSMUST00000197347 224 ntBASIC12.37□□□□□ -0.43
Rab28Q99KL7 Gm5904-201ENSMUST00000210286 865 ntBASIC12.37□□□□□ -0.43
Rab28Q99KL7 Gm6013-201ENSMUST00000212264 699 ntBASIC12.37□□□□□ -0.43
Rab28Q99KL7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.37□□□□□ -0.43
Rab28Q99KL7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.37□□□□□ -0.43
Rab28Q99KL7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab28Q99KL7 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.36□□□□□ -0.43
Rab28Q99KL7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.36□□□□□ -0.43
Rab28Q99KL7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.36□□□□□ -0.43
Rab28Q99KL7 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.36□□□□□ -0.43
Rab28Q99KL7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.36□□□□□ -0.43
Rab28Q99KL7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.36□□□□□ -0.43
Rab28Q99KL7 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms