Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb3Q91XZ7 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Gm37965-201ENSMUST00000195304 1362 ntBASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 AC129597.1-201ENSMUST00000223046 1234 ntBASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdhb3Q91XZ7 Map1b-203ENSMUST00000223725 2669 ntBASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb3Q91XZ7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Pcdhb3Q91XZ7 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb3Q91XZ7 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb3Q91XZ7 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb3Q91XZ7 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb3Q91XZ7 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb3Q91XZ7 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb3Q91XZ7 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb3Q91XZ7 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb3Q91XZ7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb3Q91XZ7 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms