Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb4Q91XZ6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb4Q91XZ6 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb4Q91XZ6 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb4Q91XZ6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb4Q91XZ6 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb4Q91XZ6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Pcdhb4Q91XZ6 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb4Q91XZ6 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb4Q91XZ6 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb4Q91XZ6 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb4Q91XZ6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Map1b-203ENSMUST00000223725 2669 ntBASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Gm14350-201ENSMUST00000116642 640 ntBASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb4Q91XZ6 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhb4Q91XZ6 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms