Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.67□□□□□ -0.38
Pcdhga4Q91XY4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhga4Q91XY4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga4Q91XY4 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga4Q91XY4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga4Q91XY4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pcdhga4Q91XY4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Pcdhga4Q91XY4 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhga4Q91XY4 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga4Q91XY4 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Mir7085-201ENSMUST00000184353 66 ntBASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhga4Q91XY4 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.65□□□□□ -0.38
Pcdhga4Q91XY4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdhga4Q91XY4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdhga4Q91XY4 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms