Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx1Q91V10 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Vsx1Q91V10 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx1Q91V10 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx1Q91V10 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Vsx1Q91V10 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx1Q91V10 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.7□□□□□ -0.38
Vsx1Q91V10 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx1Q91V10 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
Vsx1Q91V10 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx1Q91V10 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx1Q91V10 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx1Q91V10 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.7□□□□□ -0.38
Vsx1Q91V10 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Gm13813-201ENSMUST00000120998 787 ntBASIC12.69□□□□□ -0.38
Vsx1Q91V10 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.69□□□□□ -0.38
Vsx1Q91V10 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.69□□□□□ -0.38
Vsx1Q91V10 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.68□□□□□ -0.38
Vsx1Q91V10 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.68□□□□□ -0.38
Vsx1Q91V10 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.68□□□□□ -0.38
Vsx1Q91V10 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Gm23699-201ENSMUST00000158835 135 ntBASIC12.68□□□□□ -0.38
Vsx1Q91V10 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.68□□□□□ -0.38
Vsx1Q91V10 Gm3096-201ENSMUST00000185770 364 ntBASIC12.68□□□□□ -0.38
Vsx1Q91V10 Gm45224-201ENSMUST00000208203 414 ntBASIC12.68□□□□□ -0.38
Vsx1Q91V10 Gm44545-201ENSMUST00000208262 746 ntBASIC12.68□□□□□ -0.38
Vsx1Q91V10 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vsx1Q91V10 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.67□□□□□ -0.38
Vsx1Q91V10 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.67□□□□□ -0.38
Vsx1Q91V10 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms