Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Gm3436-201ENSMUST00000179930 840 ntBASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Gm5161-201ENSMUST00000075243 853 ntBASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpa1Q8VEE4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rpa1Q8VEE4 Gm45251-201ENSMUST00000209486 1465 ntBASIC12.96□□□□□ -0.34
Rpa1Q8VEE4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpa1Q8VEE4 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpa1Q8VEE4 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpa1Q8VEE4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rpa1Q8VEE4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Gm22885-201ENSMUST00000157410 107 ntBASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Gm38144-201ENSMUST00000192790 465 ntBASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Gm43703-201ENSMUST00000200523 763 ntBASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms