Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Gm9368-201ENSMUST00000219348 831 ntBASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc1Q8VCB1 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Gm13342-201ENSMUST00000121055 207 ntBASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Gm3890-201ENSMUST00000182416 207 ntBASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ndc1Q8VCB1 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms