Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Top1mtQ8R4U6 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Top1mtQ8R4U6 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Top1mtQ8R4U6 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Top1mtQ8R4U6 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Gm17150-201ENSMUST00000165577 381 ntBASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Gm32025-201ENSMUST00000217960 307 ntBASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Top1mtQ8R4U6 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Gm4984-201ENSMUST00000115987 360 ntBASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Gm26927-201ENSMUST00000182385 965 ntBASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Gm27682-201ENSMUST00000183930 110 ntBASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Top1mtQ8R4U6 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Top1mtQ8R4U6 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.3■□□□□ 0.04
Top1mtQ8R4U6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.3■□□□□ 0.04
Top1mtQ8R4U6 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Top1mtQ8R4U6 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Top1mtQ8R4U6 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms