Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Gm2517-201ENSMUST00000215651 348 ntBASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Gm23596-201ENSMUST00000104304 132 ntBASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx54Q8K4L0 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Gm24891-201ENSMUST00000104391 136 ntBASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Gm14314-201ENSMUST00000118225 1015 ntBASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Gm6397-201ENSMUST00000161973 1069 ntBASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Gm42937-201ENSMUST00000197360 752 ntBASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Gm6867-201ENSMUST00000219165 425 ntBASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Gm7551-201ENSMUST00000089593 1074 ntBASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx54Q8K4L0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx54Q8K4L0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms