Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.11□□□□□ -0.47
Clrn1Q8K445 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.11□□□□□ -0.47
Clrn1Q8K445 Gm17208-201ENSMUST00000168388 535 ntBASIC12.11□□□□□ -0.47
Clrn1Q8K445 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn1Q8K445 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.11□□□□□ -0.47
Clrn1Q8K445 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.11□□□□□ -0.47
Clrn1Q8K445 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.11□□□□□ -0.47
Clrn1Q8K445 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn1Q8K445 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn1Q8K445 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn1Q8K445 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn1Q8K445 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn1Q8K445 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn1Q8K445 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn1Q8K445 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn1Q8K445 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn1Q8K445 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn1Q8K445 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.11□□□□□ -0.47
Clrn1Q8K445 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn1Q8K445 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Clrn1Q8K445 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn1Q8K445 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn1Q8K445 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn1Q8K445 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.1□□□□□ -0.47
Clrn1Q8K445 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.1□□□□□ -0.47
Clrn1Q8K445 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.1□□□□□ -0.47
Clrn1Q8K445 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.1□□□□□ -0.47
Clrn1Q8K445 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.1□□□□□ -0.47
Clrn1Q8K445 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn1Q8K445 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Gm14704-201ENSMUST00000120300 874 ntBASIC12.09□□□□□ -0.47
Clrn1Q8K445 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.09□□□□□ -0.47
Clrn1Q8K445 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.09□□□□□ -0.47
Clrn1Q8K445 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 167.3 ms