Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.32□□□□□ -0.28
Prpf39Q8K2Z2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf39Q8K2Z2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf39Q8K2Z2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf39Q8K2Z2 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf39Q8K2Z2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Prpf39Q8K2Z2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf39Q8K2Z2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf39Q8K2Z2 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf39Q8K2Z2 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.32□□□□□ -0.28
Prpf39Q8K2Z2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf39Q8K2Z2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf39Q8K2Z2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf39Q8K2Z2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Gm12384-201ENSMUST00000119228 919 ntBASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Gm43433-201ENSMUST00000196573 481 ntBASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Gm32025-201ENSMUST00000217960 307 ntBASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf39Q8K2Z2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Gm13226-201ENSMUST00000117838 404 ntBASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Gm27731-201ENSMUST00000185192 107 ntBASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Gm45784-201ENSMUST00000188360 142 ntBASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf39Q8K2Z2 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf39Q8K2Z2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf39Q8K2Z2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf39Q8K2Z2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.29□□□□□ -0.28
Prpf39Q8K2Z2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf39Q8K2Z2 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms