Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.11□□□□□ -0.31
CopaQ8CIE6 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Gm15198-201ENSMUST00000117283 177 ntBASIC13.11□□□□□ -0.31
CopaQ8CIE6 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.11□□□□□ -0.31
CopaQ8CIE6 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Gm37497-201ENSMUST00000195830 798 ntBASIC13.11□□□□□ -0.31
CopaQ8CIE6 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Gm18054-201ENSMUST00000207539 555 ntBASIC13.11□□□□□ -0.31
CopaQ8CIE6 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.11□□□□□ -0.31
CopaQ8CIE6 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.11□□□□□ -0.31
CopaQ8CIE6 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.11□□□□□ -0.31
CopaQ8CIE6 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.11□□□□□ -0.31
CopaQ8CIE6 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CopaQ8CIE6 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.1□□□□□ -0.31
CopaQ8CIE6 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.1□□□□□ -0.31
CopaQ8CIE6 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.1□□□□□ -0.31
CopaQ8CIE6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.1□□□□□ -0.31
CopaQ8CIE6 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Gm14350-201ENSMUST00000116642 640 ntBASIC13.1□□□□□ -0.31
CopaQ8CIE6 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Gm37922-201ENSMUST00000195596 455 ntBASIC13.1□□□□□ -0.31
CopaQ8CIE6 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.1□□□□□ -0.31
CopaQ8CIE6 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.1□□□□□ -0.31
CopaQ8CIE6 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.1□□□□□ -0.31
CopaQ8CIE6 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CopaQ8CIE6 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.1□□□□□ -0.31
CopaQ8CIE6 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms