Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Gm27618-201ENSMUST00000183671 60 ntBASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Gm27430-201ENSMUST00000184585 107 ntBASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Gm44333-201ENSMUST00000197168 107 ntBASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Gm6888-201ENSMUST00000221983 706 ntBASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Gm4875-201ENSMUST00000118257 786 ntBASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Gm24513-201ENSMUST00000174964 138 ntBASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Gm19184-201ENSMUST00000196798 928 ntBASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28bQ8CEG5 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.67□□□□□ -0.38
Ccdc28bQ8CEG5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms