Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm11597-201ENSMUST00000121423 964 ntBASIC14.92□□□□□ -0.02
Alx1Q8C8B0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx1Q8C8B0 Gm37489-201ENSMUST00000191883 159 ntBASIC14.92□□□□□ -0.02
Alx1Q8C8B0 Gm5950-201ENSMUST00000213337 772 ntBASIC14.92□□□□□ -0.02
Alx1Q8C8B0 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.92□□□□□ -0.02
Alx1Q8C8B0 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.92□□□□□ -0.02
Alx1Q8C8B0 Gm9368-201ENSMUST00000219348 831 ntBASIC14.92□□□□□ -0.02
Alx1Q8C8B0 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.92□□□□□ -0.02
Alx1Q8C8B0 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx1Q8C8B0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Alx1Q8C8B0 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Alx1Q8C8B0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Alx1Q8C8B0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx1Q8C8B0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx1Q8C8B0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx1Q8C8B0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Alx1Q8C8B0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx1Q8C8B0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Alx1Q8C8B0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Alx1Q8C8B0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx1Q8C8B0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Alx1Q8C8B0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Alx1Q8C8B0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Gm12314-201ENSMUST00000118104 538 ntBASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Gm12241-201ENSMUST00000118330 726 ntBASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.91□□□□□ -0.02
Alx1Q8C8B0 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx1Q8C8B0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Gm2546-201ENSMUST00000182630 991 ntBASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Gm6621-201ENSMUST00000193251 772 ntBASIC14.9□□□□□ -0.02
Alx1Q8C8B0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx1Q8C8B0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms