Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Gm10268-201ENSMUST00000085340 555 ntBASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.12□□□□□ -0.15
Trim9Q8C7M3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.12□□□□□ -0.15
Trim9Q8C7M3 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim9Q8C7M3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Gm4984-201ENSMUST00000115987 360 ntBASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Gm38092-201ENSMUST00000195600 653 ntBASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Gm43818-201ENSMUST00000200605 466 ntBASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Gm26035-201ENSMUST00000083065 308 ntBASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim9Q8C7M3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms