Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne1Q8C166 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne1Q8C166 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cpne1Q8C166 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne1Q8C166 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpne1Q8C166 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cpne1Q8C166 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12□□□□□ -0.49
Cpne1Q8C166 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12□□□□□ -0.49
Cpne1Q8C166 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12□□□□□ -0.49
Cpne1Q8C166 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Cpne1Q8C166 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
Cpne1Q8C166 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Cpne1Q8C166 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12□□□□□ -0.49
Cpne1Q8C166 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12□□□□□ -0.49
Cpne1Q8C166 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12□□□□□ -0.49
Cpne1Q8C166 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12□□□□□ -0.49
Cpne1Q8C166 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cpne1Q8C166 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cpne1Q8C166 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Cpne1Q8C166 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12□□□□□ -0.49
Cpne1Q8C166 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpne1Q8C166 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Gm11637-201ENSMUST00000120601 592 ntBASIC11.99□□□□□ -0.49
Cpne1Q8C166 Gm1335-201ENSMUST00000121653 386 ntBASIC11.99□□□□□ -0.49
Cpne1Q8C166 Gm7029-201ENSMUST00000173226 450 ntBASIC11.99□□□□□ -0.49
Cpne1Q8C166 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.99□□□□□ -0.49
Cpne1Q8C166 Gm27682-201ENSMUST00000183930 110 ntBASIC11.99□□□□□ -0.49
Cpne1Q8C166 Gm27731-201ENSMUST00000185192 107 ntBASIC11.99□□□□□ -0.49
Cpne1Q8C166 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Gm25857-201ENSMUST00000082788 129 ntBASIC11.99□□□□□ -0.49
Cpne1Q8C166 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cpne1Q8C166 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cpne1Q8C166 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Cpne1Q8C166 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpne1Q8C166 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpne1Q8C166 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.98□□□□□ -0.49
Cpne1Q8C166 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cpne1Q8C166 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Cpne1Q8C166 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpne1Q8C166 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpne1Q8C166 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpne1Q8C166 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms