Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim35Q8C006 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Trim35Q8C006 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim35Q8C006 Gm6586-201ENSMUST00000167028 643 ntBASIC14.18□□□□□ -0.14
Trim35Q8C006 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim35Q8C006 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim35Q8C006 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim35Q8C006 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim35Q8C006 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim35Q8C006 Gm5779-201ENSMUST00000218467 910 ntBASIC14.18□□□□□ -0.14
Trim35Q8C006 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim35Q8C006 Gm45965-201ENSMUST00000221192 1284 ntBASIC14.18□□□□□ -0.14
Trim35Q8C006 Gm18955-201ENSMUST00000223173 649 ntBASIC14.18□□□□□ -0.14
Trim35Q8C006 AC160991.2-201ENSMUST00000223784 1135 ntBASIC14.18□□□□□ -0.14
Trim35Q8C006 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim35Q8C006 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim35Q8C006 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim35Q8C006 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim35Q8C006 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim35Q8C006 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim35Q8C006 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim35Q8C006 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim35Q8C006 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Gm2080-201ENSMUST00000211299 1573 ntBASIC14.17□□□□□ -0.14
Trim35Q8C006 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.17□□□□□ -0.14
Trim35Q8C006 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim35Q8C006 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim35Q8C006 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim35Q8C006 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim35Q8C006 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Trim35Q8C006 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.17□□□□□ -0.14
Trim35Q8C006 Gm14576-201ENSMUST00000118073 1111 ntBASIC14.17□□□□□ -0.14
Trim35Q8C006 Gm14607-201ENSMUST00000119119 491 ntBASIC14.17□□□□□ -0.14
Trim35Q8C006 Gm12444-201ENSMUST00000121512 877 ntBASIC14.17□□□□□ -0.14
Trim35Q8C006 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Trim35Q8C006 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.17□□□□□ -0.14
Trim35Q8C006 Gm17205-201ENSMUST00000168370 1207 ntBASIC14.17□□□□□ -0.14
Trim35Q8C006 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim35Q8C006 Gm3307-201ENSMUST00000176164 632 ntBASIC14.17□□□□□ -0.14
Trim35Q8C006 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim35Q8C006 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim35Q8C006 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim35Q8C006 Gm28274-202ENSMUST00000187775 1157 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim35Q8C006 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim35Q8C006 Gm28202-203ENSMUST00000189780 1157 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim35Q8C006 Gm29541-201ENSMUST00000191351 678 ntBASIC14.17□□□□□ -0.14
Trim35Q8C006 Gm10576-201ENSMUST00000191927 825 ntBASIC14.17□□□□□ -0.14
Trim35Q8C006 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim35Q8C006 CT030645.3-201ENSMUST00000225483 1022 ntBASIC14.17□□□□□ -0.14
Trim35Q8C006 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim35Q8C006 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim35Q8C006 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim35Q8C006 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim35Q8C006 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.17□□□□□ -0.14
Trim35Q8C006 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim35Q8C006 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Gm28533-202ENSMUST00000190106 1346 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim35Q8C006 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trim35Q8C006 AC135083.1-201ENSMUST00000227773 1331 ntBASIC14.16□□□□□ -0.14
Trim35Q8C006 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Tmod2-203ENSMUST00000164100 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Gm42432-201ENSMUST00000197902 1617 ntBASIC14.16□□□□□ -0.14
Trim35Q8C006 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim35Q8C006 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim35Q8C006 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim35Q8C006 Gm15381-201ENSMUST00000121501 1156 ntBASIC14.16□□□□□ -0.14
Trim35Q8C006 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim35Q8C006 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms