Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.4□□□□□ -0.42
Cpne3Q8BT60 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Gm15823-201ENSMUST00000064305 670 ntBASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne3Q8BT60 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Cpne3Q8BT60 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.4□□□□□ -0.43
Cpne3Q8BT60 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Gm6152-201ENSMUST00000151704 340 ntBASIC12.39□□□□□ -0.43
Cpne3Q8BT60 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Gm16372-201ENSMUST00000073088 450 ntBASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Cpne3Q8BT60 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpne3Q8BT60 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms