Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Gm18974-201ENSMUST00000221478 1031 ntBASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Gm9785-201ENSMUST00000062642 1006 ntBASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Snora73b-201ENSMUST00000083419 205 ntBASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 AC130671.2-201ENSMUST00000227224 1621 ntBASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Mir1901-201ENSMUST00000122616 78 ntBASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Gm28719-201ENSMUST00000187779 1757 ntBASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col16a1Q8BLX7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 Gm14724-201ENSMUST00000118400 537 ntBASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 Gm45909-201ENSMUST00000212413 1031 ntBASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 Gm807-202ENSMUST00000224929 408 ntBASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 Gm3052-202ENSMUST00000188254 2224 ntBASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col16a1Q8BLX7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Gm10731-201ENSMUST00000181171 448 ntBASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 AC171277.1-201ENSMUST00000216902 1441 ntBASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC16.48■□□□□ 0.23
Col16a1Q8BLX7 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Gm8492-201ENSMUST00000182375 987 ntBASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Mir7076-201ENSMUST00000183519 74 ntBASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms