Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC17.88■□□□□ 0.45
Usp54Q8BL06 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp54Q8BL06 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp54Q8BL06 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Usp54Q8BL06 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp54Q8BL06 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp54Q8BL06 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Usp54Q8BL06 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp54Q8BL06 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp54Q8BL06 Gm45550-201ENSMUST00000209380 946 ntBASIC17.88■□□□□ 0.45
Usp54Q8BL06 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC17.88■□□□□ 0.45
Usp54Q8BL06 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp54Q8BL06 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC17.88■□□□□ 0.45
Usp54Q8BL06 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp54Q8BL06 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
Usp54Q8BL06 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC17.88■□□□□ 0.45
Usp54Q8BL06 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Usp54Q8BL06 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC17.88■□□□□ 0.45
Usp54Q8BL06 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp54Q8BL06 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp54Q8BL06 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Gm8100-201ENSMUST00000182906 988 ntBASIC17.87■□□□□ 0.45
Usp54Q8BL06 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Gm37905-201ENSMUST00000195310 341 ntBASIC17.87■□□□□ 0.45
Usp54Q8BL06 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp54Q8BL06 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp54Q8BL06 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp54Q8BL06 AC151895.1-201ENSMUST00000219025 1742 ntBASIC17.87■□□□□ 0.45
Usp54Q8BL06 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Gm22144-201ENSMUST00000157402 102 ntBASIC17.87■□□□□ 0.45
Usp54Q8BL06 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Usp54Q8BL06 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Gm2965-201ENSMUST00000198365 343 ntBASIC17.87■□□□□ 0.45
Usp54Q8BL06 Gm10288-201ENSMUST00000084614 537 ntBASIC17.87■□□□□ 0.45
Usp54Q8BL06 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC17.87■□□□□ 0.45
Usp54Q8BL06 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp54Q8BL06 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC17.86■□□□□ 0.45
Usp54Q8BL06 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp54Q8BL06 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp54Q8BL06 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp54Q8BL06 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp54Q8BL06 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp54Q8BL06 Gm30238-201ENSMUST00000195528 2603 ntBASIC17.86■□□□□ 0.45
Usp54Q8BL06 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Usp54Q8BL06 AC158355.1-201ENSMUST00000215895 1705 ntBASIC17.85■□□□□ 0.45
Usp54Q8BL06 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Usp54Q8BL06 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp54Q8BL06 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp54Q8BL06 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Usp54Q8BL06 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp54Q8BL06 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp54Q8BL06 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Usp54Q8BL06 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC17.85■□□□□ 0.45
Usp54Q8BL06 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Usp54Q8BL06 Gm6905-201ENSMUST00000205729 511 ntBASIC17.85■□□□□ 0.45
Usp54Q8BL06 Gm44980-201ENSMUST00000205826 314 ntBASIC17.85■□□□□ 0.45
Usp54Q8BL06 AC154290.1-201ENSMUST00000223786 1240 ntBASIC17.85■□□□□ 0.45
Usp54Q8BL06 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp54Q8BL06 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp54Q8BL06 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp54Q8BL06 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Usp54Q8BL06 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms