Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Snord83b-201ENSMUST00000104546 94 ntBASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Gm14921-201ENSMUST00000118643 908 ntBASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Gm12291-201ENSMUST00000121627 311 ntBASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Gm14381-201ENSMUST00000122105 414 ntBASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Gm8227-201ENSMUST00000223306 571 ntBASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh19Q80TF3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Gm28196-201ENSMUST00000187719 640 ntBASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Gm43758-201ENSMUST00000199500 367 ntBASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Gm45865-201ENSMUST00000211815 945 ntBASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Gm9257-201ENSMUST00000221254 232 ntBASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Morn2-202ENSMUST00000227729 656 ntBASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh19Q80TF3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms