Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh8Q7TSK3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Gm4986-201ENSMUST00000119731 549 ntBASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Gm12502-201ENSMUST00000120197 444 ntBASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Gm38158-201ENSMUST00000194617 339 ntBASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Gm8227-201ENSMUST00000223306 571 ntBASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh8Q7TSK3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Gm13297-201ENSMUST00000120205 934 ntBASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Gm8738-201ENSMUST00000172606 329 ntBASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Gm24526-201ENSMUST00000082921 158 ntBASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh8Q7TSK3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh8Q7TSK3 Gm14381-201ENSMUST00000122105 414 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms