Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Gm7207-201ENSMUST00000211575 1067 ntBASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Gm43364-201ENSMUST00000196046 3274 ntBASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Gm15276-201ENSMUST00000145953 498 ntBASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Gm26185-201ENSMUST00000157692 266 ntBASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 AC123665.1-201ENSMUST00000228204 438 ntBASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Gm43721-201ENSMUST00000199677 2313 ntBASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Syne1Q6ZWR6 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Gm28450-201ENSMUST00000187349 638 ntBASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Gm15897-201ENSMUST00000117770 1486 ntBASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 AC131690.1-201ENSMUST00000218406 374 ntBASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Gm38049-201ENSMUST00000195698 1372 ntBASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Gm11439-201ENSMUST00000118598 409 ntBASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Gm12502-201ENSMUST00000120197 444 ntBASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Gm19863-201ENSMUST00000192480 2218 ntBASIC4.35□□□□□ -1.71
Syne1Q6ZWR6 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms