Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scaf4Q6PFF0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Scaf4Q6PFF0 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Scaf4Q6PFF0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Gm14350-201ENSMUST00000116642 640 ntBASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Gm43575-201ENSMUST00000196420 516 ntBASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.64□□□□□ -0.39
Scaf4Q6PFF0 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Gm28760-201ENSMUST00000185995 736 ntBASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Gm19184-201ENSMUST00000196798 928 ntBASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scaf4Q6PFF0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Paupar-201ENSMUST00000194826 3482 ntBASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scaf4Q6PFF0 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms