Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm43378-201ENSMUST00000199336 582 ntBASIC14.85□□□□□ -0.03
Nup98Q6PFD9 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Gm19353-201ENSMUST00000184561 445 ntBASIC14.85□□□□□ -0.03
Nup98Q6PFD9 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nup98Q6PFD9 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Gm4607-201ENSMUST00000206649 577 ntBASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup98Q6PFD9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nup98Q6PFD9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nup98Q6PFD9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
Nup98Q6PFD9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.83□□□□□ -0.03
Nup98Q6PFD9 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nup98Q6PFD9 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nup98Q6PFD9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nup98Q6PFD9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nup98Q6PFD9 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Nup98Q6PFD9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Nup98Q6PFD9 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Gm15711-201ENSMUST00000118889 535 ntBASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Gm18038-201ENSMUST00000197900 485 ntBASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Ntng1-201ENSMUST00000051253 327 ntBASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.83□□□□□ -0.04
Nup98Q6PFD9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nup98Q6PFD9 Gm8199-201ENSMUST00000121323 823 ntBASIC14.82□□□□□ -0.04
Nup98Q6PFD9 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.82□□□□□ -0.04
Nup98Q6PFD9 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nup98Q6PFD9 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.82□□□□□ -0.04
Nup98Q6PFD9 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.82□□□□□ -0.04
Nup98Q6PFD9 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nup98Q6PFD9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Nup98Q6PFD9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nup98Q6PFD9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Nup98Q6PFD9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.82□□□□□ -0.04
Nup98Q6PFD9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nup98Q6PFD9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup98Q6PFD9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms