Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Col11a2Q64739 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Col11a2Q64739 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 Gm13916-201ENSMUST00000117368 628 ntBASIC15.16■□□□□ 0.02
Col11a2Q64739 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC15.16■□□□□ 0.02
Col11a2Q64739 Gm11836-201ENSMUST00000121022 441 ntBASIC15.16■□□□□ 0.02
Col11a2Q64739 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC15.16■□□□□ 0.02
Col11a2Q64739 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Col11a2Q64739 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Col11a2Q64739 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Col11a2Q64739 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC15.16■□□□□ 0.02
Col11a2Q64739 Gm42657-201ENSMUST00000201746 211 ntBASIC15.16■□□□□ 0.02
Col11a2Q64739 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC15.16■□□□□ 0.02
Col11a2Q64739 AC154184.3-201ENSMUST00000225620 1090 ntBASIC15.16■□□□□ 0.02
Col11a2Q64739 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Col11a2Q64739 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC15.16■□□□□ 0.02
Col11a2Q64739 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Col11a2Q64739 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.16■□□□□ 0.02
Col11a2Q64739 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Col11a2Q64739 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col11a2Q64739 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC15.15■□□□□ 0.02
Col11a2Q64739 Gm42518-201ENSMUST00000196277 938 ntBASIC15.15■□□□□ 0.02
Col11a2Q64739 Gm8956-201ENSMUST00000203939 825 ntBASIC15.15■□□□□ 0.02
Col11a2Q64739 CT485606.1-201ENSMUST00000213187 878 ntBASIC15.15■□□□□ 0.02
Col11a2Q64739 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Col11a2Q64739 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Col11a2Q64739 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col11a2Q64739 Gm12856-201ENSMUST00000119471 1293 ntBASIC15.14■□□□□ 0.01
Col11a2Q64739 Gm13182-201ENSMUST00000122241 312 ntBASIC15.14■□□□□ 0.01
Col11a2Q64739 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC15.14■□□□□ 0.01
Col11a2Q64739 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC15.14■□□□□ 0.01
Col11a2Q64739 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Col11a2Q64739 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col11a2Q64739 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC15.14■□□□□ 0.01
Col11a2Q64739 Gm17877-201ENSMUST00000192578 814 ntBASIC15.14■□□□□ 0.01
Col11a2Q64739 Gm6867-201ENSMUST00000219165 425 ntBASIC15.14■□□□□ 0.01
Col11a2Q64739 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Col11a2Q64739 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Col11a2Q64739 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col11a2Q64739 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col11a2Q64739 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col11a2Q64739 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col11a2Q64739 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col11a2Q64739 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col11a2Q64739 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col11a2Q64739 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col11a2Q64739 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col11a2Q64739 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col11a2Q64739 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Col11a2Q64739 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col11a2Q64739 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC15.14■□□□□ 0.01
Col11a2Q64739 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col11a2Q64739 Gm5100-201ENSMUST00000195631 589 ntBASIC15.14■□□□□ 0.01
Col11a2Q64739 Gm19009-201ENSMUST00000223072 823 ntBASIC15.14■□□□□ 0.01
Col11a2Q64739 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col11a2Q64739 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Col11a2Q64739 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col11a2Q64739 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.14■□□□□ 0.01
Col11a2Q64739 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Col11a2Q64739 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col11a2Q64739 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col11a2Q64739 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col11a2Q64739 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms