Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd1Q61466 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd1Q61466 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.35□□□□□ -0.27
Smarcd1Q61466 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.35□□□□□ -0.27
Smarcd1Q61466 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.35□□□□□ -0.27
Smarcd1Q61466 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Smarcd1Q61466 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd1Q61466 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd1Q61466 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Smarcd1Q61466 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd1Q61466 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd1Q61466 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd1Q61466 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Smarcd1Q61466 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Smarcd1Q61466 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Smarcd1Q61466 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd1Q61466 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd1Q61466 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd1Q61466 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd1Q61466 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.34□□□□□ -0.27
Smarcd1Q61466 Gm13342-201ENSMUST00000121055 207 ntBASIC13.34□□□□□ -0.27
Smarcd1Q61466 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Morn2-202ENSMUST00000227729 656 ntBASIC13.34□□□□□ -0.27
Smarcd1Q61466 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd1Q61466 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcd1Q61466 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
Smarcd1Q61466 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.33□□□□□ -0.27
Smarcd1Q61466 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.33□□□□□ -0.27
Smarcd1Q61466 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smarcd1Q61466 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Smarcd1Q61466 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Smarcd1Q61466 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Smarcd1Q61466 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smarcd1Q61466 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.33□□□□□ -0.28
Smarcd1Q61466 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Gm43822-201ENSMUST00000200285 476 ntBASIC13.33□□□□□ -0.28
Smarcd1Q61466 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Cts7-204ENSMUST00000225321 1257 ntBASIC13.33□□□□□ -0.28
Smarcd1Q61466 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Smarcd1Q61466 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd1Q61466 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd1Q61466 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms