Protein–RNA interactions for Protein: Q61458

Ccnh, Cyclin-H, mousemouse

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnhQ61458 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.11□□□□□ -0.31
CcnhQ61458 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CcnhQ61458 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.11□□□□□ -0.31
CcnhQ61458 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.11□□□□□ -0.31
CcnhQ61458 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CcnhQ61458 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.11□□□□□ -0.31
CcnhQ61458 Gm22121-201ENSMUST00000175148 54 ntBASIC13.11□□□□□ -0.31
CcnhQ61458 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.11□□□□□ -0.31
CcnhQ61458 Gm27516-201ENSMUST00000184237 98 ntBASIC13.11□□□□□ -0.31
CcnhQ61458 Gm18584-201ENSMUST00000203098 964 ntBASIC13.11□□□□□ -0.31
CcnhQ61458 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 Gm18041-201ENSMUST00000218210 618 ntBASIC13.11□□□□□ -0.31
CcnhQ61458 Gm45930-201ENSMUST00000221330 292 ntBASIC13.11□□□□□ -0.31
CcnhQ61458 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CcnhQ61458 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CcnhQ61458 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CcnhQ61458 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.11□□□□□ -0.31
CcnhQ61458 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CcnhQ61458 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcnhQ61458 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.11□□□□□ -0.31
CcnhQ61458 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.11□□□□□ -0.31
CcnhQ61458 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.1□□□□□ -0.31
CcnhQ61458 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CcnhQ61458 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CcnhQ61458 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.1□□□□□ -0.31
CcnhQ61458 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Mir8109-201ENSMUST00000184375 117 ntBASIC13.1□□□□□ -0.31
CcnhQ61458 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.1□□□□□ -0.31
CcnhQ61458 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.1□□□□□ -0.31
CcnhQ61458 Olfr284-202ENSMUST00000206647 966 ntBASIC13.1□□□□□ -0.31
CcnhQ61458 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.1□□□□□ -0.31
CcnhQ61458 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.1□□□□□ -0.31
CcnhQ61458 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.1□□□□□ -0.31
CcnhQ61458 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CcnhQ61458 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.1□□□□□ -0.31
CcnhQ61458 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcnhQ61458 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CcnhQ61458 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CcnhQ61458 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CcnhQ61458 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CcnhQ61458 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CcnhQ61458 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CcnhQ61458 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CcnhQ61458 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CcnhQ61458 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CcnhQ61458 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CcnhQ61458 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CcnhQ61458 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CcnhQ61458 Snord83b-201ENSMUST00000104546 94 ntBASIC13.09□□□□□ -0.31
CcnhQ61458 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.09□□□□□ -0.31
CcnhQ61458 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CcnhQ61458 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CcnhQ61458 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.09□□□□□ -0.31
CcnhQ61458 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CcnhQ61458 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.09□□□□□ -0.31
CcnhQ61458 Gm29396-201ENSMUST00000185659 716 ntBASIC13.09□□□□□ -0.31
CcnhQ61458 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CcnhQ61458 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.09□□□□□ -0.31
CcnhQ61458 Gm18935-201ENSMUST00000212692 664 ntBASIC13.09□□□□□ -0.31
CcnhQ61458 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms