Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.33□□□□□ -0.43
ClpbQ60649 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
ClpbQ60649 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
ClpbQ60649 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.33□□□□□ -0.44
ClpbQ60649 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.33□□□□□ -0.44
ClpbQ60649 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.33□□□□□ -0.44
ClpbQ60649 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.33□□□□□ -0.44
ClpbQ60649 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.33□□□□□ -0.44
ClpbQ60649 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.33□□□□□ -0.44
ClpbQ60649 Gm44069-201ENSMUST00000204898 506 ntBASIC12.33□□□□□ -0.44
ClpbQ60649 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.33□□□□□ -0.44
ClpbQ60649 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.33□□□□□ -0.44
ClpbQ60649 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClpbQ60649 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.33□□□□□ -0.44
ClpbQ60649 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.32□□□□□ -0.44
ClpbQ60649 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.32□□□□□ -0.44
ClpbQ60649 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.32□□□□□ -0.44
ClpbQ60649 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Gm12957-201ENSMUST00000117835 377 ntBASIC12.32□□□□□ -0.44
ClpbQ60649 Gm13369-201ENSMUST00000119442 987 ntBASIC12.32□□□□□ -0.44
ClpbQ60649 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.32□□□□□ -0.44
ClpbQ60649 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.32□□□□□ -0.44
ClpbQ60649 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.32□□□□□ -0.44
ClpbQ60649 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ClpbQ60649 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
ClpbQ60649 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClpbQ60649 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
ClpbQ60649 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ClpbQ60649 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ClpbQ60649 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.31□□□□□ -0.44
ClpbQ60649 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.31□□□□□ -0.44
ClpbQ60649 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
ClpbQ60649 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.31□□□□□ -0.44
ClpbQ60649 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.31□□□□□ -0.44
ClpbQ60649 Gm16177-201ENSMUST00000120728 718 ntBASIC12.31□□□□□ -0.44
ClpbQ60649 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.31□□□□□ -0.44
ClpbQ60649 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
ClpbQ60649 Gm37497-201ENSMUST00000195830 798 ntBASIC12.31□□□□□ -0.44
ClpbQ60649 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClpbQ60649 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.31□□□□□ -0.44
ClpbQ60649 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.31□□□□□ -0.44
ClpbQ60649 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
ClpbQ60649 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
ClpbQ60649 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms