Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Gm14452-201ENSMUST00000118680 1632 ntBASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3-3Q5R1C3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Rprl2-201ENSMUST00000157150 290 ntBASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 AA543401-201ENSMUST00000164248 1269 ntBASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Gm5364-201ENSMUST00000216789 889 ntBASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 CT010486.3-201ENSMUST00000224555 811 ntBASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Gm3052-202ENSMUST00000188254 2224 ntBASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Gm44831-201ENSMUST00000208469 2989 ntBASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3-3Q5R1C3 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Nrn1-204ENSMUST00000224323 1779 ntBASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3-3Q5R1C3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms