Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Gm17208-201ENSMUST00000168388 535 ntBASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Gm4271-201ENSMUST00000174444 973 ntBASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Gm19891-201ENSMUST00000189771 303 ntBASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Mir339-201ENSMUST00000083659 96 ntBASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Gm38385-201ENSMUST00000194454 2351 ntBASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf20Q5DTM8 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Gm29649-201ENSMUST00000185649 419 ntBASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rnf20Q5DTM8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf20Q5DTM8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf20Q5DTM8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf20Q5DTM8 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rnf20Q5DTM8 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf20Q5DTM8 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf20Q5DTM8 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf20Q5DTM8 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf20Q5DTM8 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rnf20Q5DTM8 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf20Q5DTM8 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf20Q5DTM8 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Gm22121-201ENSMUST00000175148 54 ntBASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Gm7561-201ENSMUST00000211203 886 ntBASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Gm6091-201ENSMUST00000098307 165 ntBASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms