Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.64□□□□□ -0.23
Syne3Q4FZC9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.64□□□□□ -0.23
Syne3Q4FZC9 Gm8598-201ENSMUST00000221184 836 ntBASIC13.64□□□□□ -0.23
Syne3Q4FZC9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.64□□□□□ -0.23
Syne3Q4FZC9 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Syne3Q4FZC9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Syne3Q4FZC9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Syne3Q4FZC9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne3Q4FZC9 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Syne3Q4FZC9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne3Q4FZC9 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Syne3Q4FZC9 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.63□□□□□ -0.23
Syne3Q4FZC9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Gm37922-201ENSMUST00000195596 455 ntBASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Gm6091-201ENSMUST00000098307 165 ntBASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Syne3Q4FZC9 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.61□□□□□ -0.23
Syne3Q4FZC9 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms