Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnga4Q3UW12 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnga4Q3UW12 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnga4Q3UW12 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnga4Q3UW12 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cnga4Q3UW12 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnga4Q3UW12 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.01□□□□□ -0.33
Cnga4Q3UW12 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.01□□□□□ -0.33
Cnga4Q3UW12 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.01□□□□□ -0.33
Cnga4Q3UW12 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnga4Q3UW12 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cnga4Q3UW12 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Cnga4Q3UW12 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnga4Q3UW12 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cnga4Q3UW12 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13□□□□□ -0.33
Cnga4Q3UW12 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13□□□□□ -0.33
Cnga4Q3UW12 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13□□□□□ -0.33
Cnga4Q3UW12 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Gm5053-201ENSMUST00000208361 1678 ntBASIC13□□□□□ -0.33
Cnga4Q3UW12 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13□□□□□ -0.33
Cnga4Q3UW12 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Gm2213-201ENSMUST00000197485 688 ntBASIC13□□□□□ -0.33
Cnga4Q3UW12 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13□□□□□ -0.33
Cnga4Q3UW12 AC169036.1-201ENSMUST00000227994 296 ntBASIC13□□□□□ -0.33
Cnga4Q3UW12 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13□□□□□ -0.33
Cnga4Q3UW12 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cnga4Q3UW12 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13□□□□□ -0.33
Cnga4Q3UW12 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cnga4Q3UW12 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Gm6888-201ENSMUST00000221983 706 ntBASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cnga4Q3UW12 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cnga4Q3UW12 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cnga4Q3UW12 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cnga4Q3UW12 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cnga4Q3UW12 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.98□□□□□ -0.33
Cnga4Q3UW12 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cnga4Q3UW12 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cnga4Q3UW12 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms