Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.86□□□□□ -0.35
Fam196aQ3USH1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Gm9463-201ENSMUST00000206707 601 ntBASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Gm9132-201ENSMUST00000210182 832 ntBASIC12.86□□□□□ -0.35
Fam196aQ3USH1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fam196aQ3USH1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Gm14644-201ENSMUST00000116671 647 ntBASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fam196aQ3USH1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms