Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Gm14921-201ENSMUST00000118643 908 ntBASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Gm17420-201ENSMUST00000164753 153 ntBASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Gm27572-201ENSMUST00000183702 255 ntBASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Gm45880-201ENSMUST00000213041 853 ntBASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Gm10478-201ENSMUST00000084451 396 ntBASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nlrc4Q3UP24 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Gm16296-201ENSMUST00000159905 325 ntBASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Gm43133-201ENSMUST00000197472 463 ntBASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nlrc4Q3UP24 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Gm8738-201ENSMUST00000172606 329 ntBASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Gm38158-201ENSMUST00000194617 339 ntBASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Gm42693-201ENSMUST00000196779 631 ntBASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Gm43118-201ENSMUST00000199149 775 ntBASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms