Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Gm18801-201ENSMUST00000186616 536 ntBASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Gm5555-201ENSMUST00000120352 1111 ntBASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Gm7722-201ENSMUST00000120646 741 ntBASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Gm24248-201ENSMUST00000157321 322 ntBASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Gm9136-201ENSMUST00000193368 454 ntBASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Gm45135-201ENSMUST00000206787 1184 ntBASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Gm18499-201ENSMUST00000220808 1021 ntBASIC11.72□□□□□ -0.53
Spg11Q3UHA3 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spg11Q3UHA3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Gm13916-201ENSMUST00000117368 628 ntBASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Gm12857-201ENSMUST00000117678 592 ntBASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Gm23045-201ENSMUST00000175041 96 ntBASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Gm44647-201ENSMUST00000207402 428 ntBASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Gm45481-201ENSMUST00000209717 877 ntBASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Gm6390-201ENSMUST00000215034 589 ntBASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Spg11Q3UHA3 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Spg11Q3UHA3 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Spg11Q3UHA3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Spg11Q3UHA3 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Spg11Q3UHA3 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.71□□□□□ -0.54
Spg11Q3UHA3 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.71□□□□□ -0.54
Spg11Q3UHA3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Spg11Q3UHA3 Gm8723-201ENSMUST00000166076 820 ntBASIC11.71□□□□□ -0.54
Spg11Q3UHA3 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.54
Spg11Q3UHA3 Gm8701-201ENSMUST00000169259 874 ntBASIC11.71□□□□□ -0.54
Spg11Q3UHA3 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Spg11Q3UHA3 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.54
Spg11Q3UHA3 Gm8756-201ENSMUST00000183250 929 ntBASIC11.71□□□□□ -0.54
Spg11Q3UHA3 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Spg11Q3UHA3 Gm29763-201ENSMUST00000205306 616 ntBASIC11.71□□□□□ -0.54
Spg11Q3UHA3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.71□□□□□ -0.54
Spg11Q3UHA3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.71□□□□□ -0.54
Spg11Q3UHA3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.71□□□□□ -0.54
Spg11Q3UHA3 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Spg11Q3UHA3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Spg11Q3UHA3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Spg11Q3UHA3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Spg11Q3UHA3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Gm12337-201ENSMUST00000119634 400 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms