Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.1■□□□□ 0.01
Limch1Q3UH68 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Limch1Q3UH68 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Limch1Q3UH68 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Limch1Q3UH68 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.1■□□□□ 0.01
Limch1Q3UH68 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Limch1Q3UH68 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Limch1Q3UH68 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Limch1Q3UH68 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.1■□□□□ 0.01
Limch1Q3UH68 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Limch1Q3UH68 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Limch1Q3UH68 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Limch1Q3UH68 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Limch1Q3UH68 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Limch1Q3UH68 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.1■□□□□ 0.01
Limch1Q3UH68 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Limch1Q3UH68 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Limch1Q3UH68 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Limch1Q3UH68 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Limch1Q3UH68 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Limch1Q3UH68 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Limch1Q3UH68 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Limch1Q3UH68 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Gm38002-201ENSMUST00000193255 180 ntBASIC15.09■□□□□ 0.01
Limch1Q3UH68 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Limch1Q3UH68 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Limch1Q3UH68 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Limch1Q3UH68 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Limch1Q3UH68 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Limch1Q3UH68 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Limch1Q3UH68 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Limch1Q3UH68 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
Limch1Q3UH68 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Limch1Q3UH68 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Limch1Q3UH68 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Limch1Q3UH68 Gm14723-201ENSMUST00000118686 215 ntBASIC15.08■□□□□ 0
Limch1Q3UH68 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.08■□□□□ 0
Limch1Q3UH68 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.08■□□□□ 0
Limch1Q3UH68 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.08■□□□□ 0
Limch1Q3UH68 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Limch1Q3UH68 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Limch1Q3UH68 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.08■□□□□ 0
Limch1Q3UH68 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Limch1Q3UH68 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Limch1Q3UH68 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.08■□□□□ 0
Limch1Q3UH68 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Limch1Q3UH68 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Limch1Q3UH68 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Limch1Q3UH68 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Limch1Q3UH68 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Limch1Q3UH68 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Limch1Q3UH68 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Limch1Q3UH68 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Limch1Q3UH68 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Limch1Q3UH68 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Limch1Q3UH68 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Limch1Q3UH68 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Limch1Q3UH68 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.07■□□□□ 0
Limch1Q3UH68 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Limch1Q3UH68 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC15.07■□□□□ 0
Limch1Q3UH68 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Limch1Q3UH68 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Limch1Q3UH68 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.07■□□□□ 0
Limch1Q3UH68 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.07■□□□□ 0
Limch1Q3UH68 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.07■□□□□ 0
Limch1Q3UH68 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.07■□□□□ 0
Limch1Q3UH68 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.07■□□□□ 0
Limch1Q3UH68 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Limch1Q3UH68 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Limch1Q3UH68 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Limch1Q3UH68 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms