Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Cxcr5Q04683 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcr5Q04683 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cxcr5Q04683 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cxcr5Q04683 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Gm15429-201ENSMUST00000151268 798 ntBASIC12.19□□□□□ -0.46
Cxcr5Q04683 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.19□□□□□ -0.46
Cxcr5Q04683 Gm20949-201ENSMUST00000206478 952 ntBASIC12.19□□□□□ -0.46
Cxcr5Q04683 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Gm6218-201ENSMUST00000219812 628 ntBASIC12.19□□□□□ -0.46
Cxcr5Q04683 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Pck2-205ENSMUST00000226352 2784 ntBASIC12.19□□□□□ -0.46
Cxcr5Q04683 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcr5Q04683 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Gm6152-201ENSMUST00000151704 340 ntBASIC12.18□□□□□ -0.46
Cxcr5Q04683 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Mir7654-201ENSMUST00000185082 70 ntBASIC12.18□□□□□ -0.46
Cxcr5Q04683 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.18□□□□□ -0.46
Cxcr5Q04683 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cxcr5Q04683 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cxcr5Q04683 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cxcr5Q04683 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcr5Q04683 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Cxcr5Q04683 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Cxcr5Q04683 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcr5Q04683 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcr5Q04683 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcr5Q04683 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcr5Q04683 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcr5Q04683 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcr5Q04683 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cxcr5Q04683 Gm15920-201ENSMUST00000118998 402 ntBASIC12.17□□□□□ -0.46
Cxcr5Q04683 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms