Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pfdn6Q03958 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pfdn6Q03958 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pfdn6Q03958 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.92□□□□□ -0.34
Pfdn6Q03958 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pfdn6Q03958 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pfdn6Q03958 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pfdn6Q03958 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pfdn6Q03958 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.91□□□□□ -0.34
Pfdn6Q03958 Mir1894-201ENSMUST00000122802 81 ntBASIC12.91□□□□□ -0.34
Pfdn6Q03958 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.91□□□□□ -0.34
Pfdn6Q03958 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.91□□□□□ -0.34
Pfdn6Q03958 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.91□□□□□ -0.34
Pfdn6Q03958 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.91□□□□□ -0.34
Pfdn6Q03958 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pfdn6Q03958 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.9□□□□□ -0.34
Pfdn6Q03958 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.9□□□□□ -0.34
Pfdn6Q03958 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.9□□□□□ -0.34
Pfdn6Q03958 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.9□□□□□ -0.34
Pfdn6Q03958 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.9□□□□□ -0.34
Pfdn6Q03958 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pfdn6Q03958 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.9□□□□□ -0.35
Pfdn6Q03958 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pfdn6Q03958 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pfdn6Q03958 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.89□□□□□ -0.35
Pfdn6Q03958 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Gm15806-201ENSMUST00000120696 955 ntBASIC12.89□□□□□ -0.35
Pfdn6Q03958 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Pfdn6Q03958 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms