Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Gabpb1Q00420 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.03□□□□□ -0.32
Gabpb1Q00420 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gabpb1Q00420 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gabpb1Q00420 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gabpb1Q00420 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.03□□□□□ -0.32
Gabpb1Q00420 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Gabpb1Q00420 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gabpb1Q00420 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Gabpb1Q00420 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gabpb1Q00420 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gabpb1Q00420 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Gabpb1Q00420 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.03□□□□□ -0.32
Gabpb1Q00420 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.03□□□□□ -0.32
Gabpb1Q00420 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gabpb1Q00420 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gabpb1Q00420 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gabpb1Q00420 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gabpb1Q00420 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gabpb1Q00420 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gabpb1Q00420 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.02□□□□□ -0.32
Gabpb1Q00420 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Gabpb1Q00420 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gabpb1Q00420 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Gabpb1Q00420 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gabpb1Q00420 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gabpb1Q00420 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gabpb1Q00420 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gabpb1Q00420 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Gabpb1Q00420 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Gm24644-201ENSMUST00000157114 139 ntBASIC13.02□□□□□ -0.33
Gabpb1Q00420 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Gm27331-201ENSMUST00000183705 60 ntBASIC13.02□□□□□ -0.33
Gabpb1Q00420 Gm27847-201ENSMUST00000183711 107 ntBASIC13.02□□□□□ -0.33
Gabpb1Q00420 Gm27375-201ENSMUST00000183799 107 ntBASIC13.02□□□□□ -0.33
Gabpb1Q00420 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gabpb1Q00420 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Gabpb1Q00420 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.01□□□□□ -0.33
Gabpb1Q00420 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.01□□□□□ -0.33
Gabpb1Q00420 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.01□□□□□ -0.33
Gabpb1Q00420 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Gm4271-201ENSMUST00000174444 973 ntBASIC13.01□□□□□ -0.33
Gabpb1Q00420 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Gm4768-201ENSMUST00000206199 686 ntBASIC13.01□□□□□ -0.33
Gabpb1Q00420 Gm29705-201ENSMUST00000212598 474 ntBASIC13.01□□□□□ -0.33
Gabpb1Q00420 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabpb1Q00420 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.01□□□□□ -0.33
Gabpb1Q00420 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms