Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Xrn1P97789 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Xrn1P97789 Gm24891-201ENSMUST00000104391 136 ntBASIC17.8■□□□□ 0.44
Xrn1P97789 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Xrn1P97789 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Xrn1P97789 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Xrn1P97789 Gm37028-201ENSMUST00000194276 107 ntBASIC17.8■□□□□ 0.44
Xrn1P97789 Gm44158-201ENSMUST00000203881 505 ntBASIC17.8■□□□□ 0.44
Xrn1P97789 AC122408.1-201ENSMUST00000218949 218 ntBASIC17.8■□□□□ 0.44
Xrn1P97789 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC17.8■□□□□ 0.44
Xrn1P97789 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Xrn1P97789 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Xrn1P97789 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Xrn1P97789 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC17.8■□□□□ 0.44
Xrn1P97789 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Xrn1P97789 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Xrn1P97789 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Xrn1P97789 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Xrn1P97789 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC17.79■□□□□ 0.44
Xrn1P97789 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Xrn1P97789 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC17.79■□□□□ 0.44
Xrn1P97789 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 Gm15352-201ENSMUST00000118696 270 ntBASIC17.79■□□□□ 0.44
Xrn1P97789 Gm8737-201ENSMUST00000122208 642 ntBASIC17.79■□□□□ 0.44
Xrn1P97789 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 Mir6998-201ENSMUST00000183343 64 ntBASIC17.79■□□□□ 0.44
Xrn1P97789 Gm38151-201ENSMUST00000195085 289 ntBASIC17.79■□□□□ 0.44
Xrn1P97789 Gm44329-201ENSMUST00000197469 112 ntBASIC17.79■□□□□ 0.44
Xrn1P97789 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC17.79■□□□□ 0.44
Xrn1P97789 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Xrn1P97789 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.79■□□□□ 0.44
Xrn1P97789 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrn1P97789 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Xrn1P97789 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Xrn1P97789 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Xrn1P97789 Gm15566-201ENSMUST00000121130 590 ntBASIC17.78■□□□□ 0.44
Xrn1P97789 n-R5s84-201ENSMUST00000122591 109 ntBASIC17.78■□□□□ 0.44
Xrn1P97789 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC17.78■□□□□ 0.44
Xrn1P97789 Gm18367-201ENSMUST00000176139 600 ntBASIC17.78■□□□□ 0.44
Xrn1P97789 Gm28388-201ENSMUST00000186262 437 ntBASIC17.78■□□□□ 0.44
Xrn1P97789 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC17.78■□□□□ 0.44
Xrn1P97789 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrn1P97789 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrn1P97789 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrn1P97789 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrn1P97789 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrn1P97789 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Xrn1P97789 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.78■□□□□ 0.44
Xrn1P97789 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Xrn1P97789 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Xrn1P97789 Gm19863-201ENSMUST00000192480 2218 ntBASIC17.78■□□□□ 0.44
Xrn1P97789 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Xrn1P97789 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrn1P97789 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrn1P97789 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC17.78■□□□□ 0.44
Xrn1P97789 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Xrn1P97789 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrn1P97789 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrn1P97789 Gm13910-201ENSMUST00000121752 1428 ntBASIC17.78■□□□□ 0.44
Xrn1P97789 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrn1P97789 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrn1P97789 Ighv5-11-201ENSMUST00000193354 371 ntBASIC17.78■□□□□ 0.44
Xrn1P97789 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC17.78■□□□□ 0.44
Xrn1P97789 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC17.78■□□□□ 0.44
Xrn1P97789 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC17.78■□□□□ 0.44
Xrn1P97789 AC121960.1-201ENSMUST00000227982 564 ntBASIC17.78■□□□□ 0.44
Xrn1P97789 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrn1P97789 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC17.77■□□□□ 0.44
Xrn1P97789 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Xrn1P97789 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Xrn1P97789 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Xrn1P97789 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Xrn1P97789 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Xrn1P97789 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Xrn1P97789 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Xrn1P97789 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Xrn1P97789 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Xrn1P97789 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Xrn1P97789 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Xrn1P97789 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Xrn1P97789 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Xrn1P97789 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Xrn1P97789 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms