Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.84□□□□□ -0.51
Cacna1aP97445 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.84□□□□□ -0.51
Cacna1aP97445 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.84□□□□□ -0.51
Cacna1aP97445 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.84□□□□□ -0.51
Cacna1aP97445 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.84□□□□□ -0.51
Cacna1aP97445 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.84□□□□□ -0.51
Cacna1aP97445 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Cacna1aP97445 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Cacna1aP97445 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.84□□□□□ -0.51
Cacna1aP97445 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.84□□□□□ -0.51
Cacna1aP97445 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.84□□□□□ -0.51
Cacna1aP97445 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cacna1aP97445 Gm12795-201ENSMUST00000117594 539 ntBASIC11.84□□□□□ -0.51
Cacna1aP97445 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.84□□□□□ -0.51
Cacna1aP97445 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.84□□□□□ -0.51
Cacna1aP97445 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.84□□□□□ -0.51
Cacna1aP97445 Gm38092-201ENSMUST00000195600 653 ntBASIC11.84□□□□□ -0.51
Cacna1aP97445 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.84□□□□□ -0.51
Cacna1aP97445 Gm8712-201ENSMUST00000221090 701 ntBASIC11.84□□□□□ -0.51
Cacna1aP97445 Ntng1-201ENSMUST00000051253 327 ntBASIC11.84□□□□□ -0.51
Cacna1aP97445 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.84□□□□□ -0.51
Cacna1aP97445 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.84□□□□□ -0.51
Cacna1aP97445 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cacna1aP97445 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cacna1aP97445 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cacna1aP97445 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cacna1aP97445 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.83□□□□□ -0.51
Cacna1aP97445 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cacna1aP97445 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.83□□□□□ -0.52
Cacna1aP97445 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.83□□□□□ -0.52
Cacna1aP97445 Gm37201-201ENSMUST00000191845 523 ntBASIC11.83□□□□□ -0.52
Cacna1aP97445 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.83□□□□□ -0.52
Cacna1aP97445 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.83□□□□□ -0.52
Cacna1aP97445 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.83□□□□□ -0.52
Cacna1aP97445 Gm7848-201ENSMUST00000210739 718 ntBASIC11.83□□□□□ -0.52
Cacna1aP97445 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Cacna1aP97445 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cacna1aP97445 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cacna1aP97445 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.83□□□□□ -0.52
Cacna1aP97445 Gm7902-201ENSMUST00000198842 947 ntBASIC11.83□□□□□ -0.52
Cacna1aP97445 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.83□□□□□ -0.52
Cacna1aP97445 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cacna1aP97445 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.83□□□□□ -0.52
Cacna1aP97445 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cacna1aP97445 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC11.82□□□□□ -0.52
Cacna1aP97445 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cacna1aP97445 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cacna1aP97445 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cacna1aP97445 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cacna1aP97445 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cacna1aP97445 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Cacna1aP97445 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cacna1aP97445 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms