Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Nkx2-3P97334 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nkx2-3P97334 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.02■□□□□ 0.15
Nkx2-3P97334 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Nkx2-3P97334 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Nkx2-3P97334 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nkx2-3P97334 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-3P97334 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-3P97334 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC16.01■□□□□ 0.15
Nkx2-3P97334 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Gm44851-201ENSMUST00000205735 2309 ntBASIC16.01■□□□□ 0.15
Nkx2-3P97334 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Gm43858-201ENSMUST00000199418 1778 ntBASIC16.01■□□□□ 0.15
Nkx2-3P97334 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Gm23949-201ENSMUST00000104027 127 ntBASIC16.01■□□□□ 0.15
Nkx2-3P97334 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Gm15711-201ENSMUST00000118889 535 ntBASIC16.01■□□□□ 0.15
Nkx2-3P97334 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Gm8959-201ENSMUST00000213150 571 ntBASIC16.01■□□□□ 0.15
Nkx2-3P97334 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkx2-3P97334 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 AC151895.1-201ENSMUST00000219025 1742 ntBASIC16■□□□□ 0.15
Nkx2-3P97334 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Gm45638-201ENSMUST00000211507 2878 ntBASIC16■□□□□ 0.15
Nkx2-3P97334 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Gm24231-201ENSMUST00000104315 133 ntBASIC16■□□□□ 0.15
Nkx2-3P97334 Gm6335-201ENSMUST00000118081 1194 ntBASIC16■□□□□ 0.15
Nkx2-3P97334 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC16■□□□□ 0.15
Nkx2-3P97334 Gm7816-201ENSMUST00000119884 1194 ntBASIC16■□□□□ 0.15
Nkx2-3P97334 Gm15542-201ENSMUST00000121585 1194 ntBASIC16■□□□□ 0.15
Nkx2-3P97334 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC16■□□□□ 0.15
Nkx2-3P97334 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC16■□□□□ 0.15
Nkx2-3P97334 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC16■□□□□ 0.15
Nkx2-3P97334 Gm8546-201ENSMUST00000178288 1264 ntBASIC16■□□□□ 0.15
Nkx2-3P97334 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC16■□□□□ 0.15
Nkx2-3P97334 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC16■□□□□ 0.15
Nkx2-3P97334 Gm37744-201ENSMUST00000194616 1590 ntBASIC16■□□□□ 0.15
Nkx2-3P97334 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkx2-3P97334 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC15.99■□□□□ 0.15
Nkx2-3P97334 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC15.99■□□□□ 0.15
Nkx2-3P97334 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC15.99■□□□□ 0.15
Nkx2-3P97334 Rmrp-201ENSMUST00000157463 271 ntBASIC15.99■□□□□ 0.15
Nkx2-3P97334 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC15.99■□□□□ 0.15
Nkx2-3P97334 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.99■□□□□ 0.15
Nkx2-3P97334 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-3P97334 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.99■□□□□ 0.15
Nkx2-3P97334 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms