Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.44□□□□□ -0.58
H3f3aP84244 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
H3f3aP84244 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.44□□□□□ -0.58
H3f3aP84244 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
H3f3aP84244 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H3f3aP84244 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
H3f3aP84244 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H3f3aP84244 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
H3f3aP84244 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H3f3aP84244 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.43□□□□□ -0.58
H3f3aP84244 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H3f3aP84244 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.43□□□□□ -0.58
H3f3aP84244 Gm27514-201ENSMUST00000183692 110 ntBASIC11.43□□□□□ -0.58
H3f3aP84244 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.43□□□□□ -0.58
H3f3aP84244 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H3f3aP84244 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
H3f3aP84244 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H3f3aP84244 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
H3f3aP84244 Mir339-201ENSMUST00000083659 96 ntBASIC11.43□□□□□ -0.58
H3f3aP84244 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
H3f3aP84244 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
H3f3aP84244 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
H3f3aP84244 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
H3f3aP84244 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
H3f3aP84244 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H3f3aP84244 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
H3f3aP84244 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H3f3aP84244 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
H3f3aP84244 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
H3f3aP84244 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H3f3aP84244 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H3f3aP84244 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H3f3aP84244 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.42□□□□□ -0.58
H3f3aP84244 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.42□□□□□ -0.58
H3f3aP84244 Gm23931-201ENSMUST00000103842 109 ntBASIC11.42□□□□□ -0.58
H3f3aP84244 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.42□□□□□ -0.58
H3f3aP84244 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
H3f3aP84244 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.42□□□□□ -0.58
H3f3aP84244 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Gm25927-201ENSMUST00000175058 117 ntBASIC11.42□□□□□ -0.58
H3f3aP84244 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Mir7085-201ENSMUST00000184353 66 ntBASIC11.42□□□□□ -0.58
H3f3aP84244 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.42□□□□□ -0.58
H3f3aP84244 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
H3f3aP84244 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.42□□□□□ -0.58
H3f3aP84244 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.42□□□□□ -0.58
H3f3aP84244 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.42□□□□□ -0.58
H3f3aP84244 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.42□□□□□ -0.58
H3f3aP84244 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3aP84244 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.41□□□□□ -0.58
H3f3aP84244 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
H3f3aP84244 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.41□□□□□ -0.58
H3f3aP84244 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
H3f3aP84244 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.41□□□□□ -0.58
H3f3aP84244 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
H3f3aP84244 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.41□□□□□ -0.58
H3f3aP84244 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms