Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Gm5356-201ENSMUST00000093326 615 ntBASIC11.29□□□□□ -0.6
Hist1h3bP84228 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hist1h3bP84228 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist1h3bP84228 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Gm8805-201ENSMUST00000117848 313 ntBASIC11.28□□□□□ -0.6
Hist1h3bP84228 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.28□□□□□ -0.6
Hist1h3bP84228 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.28□□□□□ -0.6
Hist1h3bP84228 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.28□□□□□ -0.6
Hist1h3bP84228 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.27□□□□□ -0.6
Hist1h3bP84228 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist1h3bP84228 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist1h3bP84228 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.27□□□□□ -0.6
Hist1h3bP84228 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist1h3bP84228 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist1h3bP84228 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.27□□□□□ -0.6
Hist1h3bP84228 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist1h3bP84228 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Hist1h3bP84228 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist1h3bP84228 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Hist1h3bP84228 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.27□□□□□ -0.6
Hist1h3bP84228 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.27□□□□□ -0.61
Hist1h3bP84228 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Hist1h3bP84228 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist1h3bP84228 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.27□□□□□ -0.61
Hist1h3bP84228 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hist1h3bP84228 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hist1h3bP84228 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hist1h3bP84228 Gm11637-201ENSMUST00000120601 592 ntBASIC11.27□□□□□ -0.61
Hist1h3bP84228 Gm13813-201ENSMUST00000120998 787 ntBASIC11.27□□□□□ -0.61
Hist1h3bP84228 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist1h3bP84228 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hist1h3bP84228 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hist1h3bP84228 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist1h3bP84228 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.27□□□□□ -0.61
Hist1h3bP84228 Gm8652-201ENSMUST00000181363 964 ntBASIC11.27□□□□□ -0.61
Hist1h3bP84228 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.27□□□□□ -0.61
Hist1h3bP84228 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.27□□□□□ -0.61
Hist1h3bP84228 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.27□□□□□ -0.61
Hist1h3bP84228 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.27□□□□□ -0.61
Hist1h3bP84228 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.27□□□□□ -0.61
Hist1h3bP84228 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Hist1h3bP84228 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms