Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sox3P53784 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sox3P53784 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sox3P53784 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.31□□□□□ -0.44
Sox3P53784 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.31□□□□□ -0.44
Sox3P53784 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sox3P53784 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.31□□□□□ -0.44
Sox3P53784 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.31□□□□□ -0.44
Sox3P53784 Gm7593-201ENSMUST00000187246 644 ntBASIC12.31□□□□□ -0.44
Sox3P53784 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.31□□□□□ -0.44
Sox3P53784 Gm45186-201ENSMUST00000206874 478 ntBASIC12.31□□□□□ -0.44
Sox3P53784 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.31□□□□□ -0.44
Sox3P53784 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sox3P53784 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sox3P53784 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.31□□□□□ -0.44
Sox3P53784 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.31□□□□□ -0.44
Sox3P53784 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Sox3P53784 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.31□□□□□ -0.44
Sox3P53784 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox3P53784 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Sox3P53784 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sox3P53784 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.3□□□□□ -0.44
Sox3P53784 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.3□□□□□ -0.44
Sox3P53784 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox3P53784 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox3P53784 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.3□□□□□ -0.44
Sox3P53784 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Sox3P53784 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox3P53784 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Sox3P53784 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox3P53784 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sox3P53784 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sox3P53784 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sox3P53784 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sox3P53784 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sox3P53784 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.29□□□□□ -0.44
Sox3P53784 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms