Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.41□□□□□ -0.42
Lbx1P52955 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lbx1P52955 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Lbx1P52955 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lbx1P52955 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lbx1P52955 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lbx1P52955 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lbx1P52955 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lbx1P52955 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lbx1P52955 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lbx1P52955 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lbx1P52955 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Lbx1P52955 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lbx1P52955 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lbx1P52955 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lbx1P52955 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.41□□□□□ -0.42
Lbx1P52955 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.41□□□□□ -0.42
Lbx1P52955 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lbx1P52955 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lbx1P52955 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lbx1P52955 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lbx1P52955 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lbx1P52955 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lbx1P52955 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lbx1P52955 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lbx1P52955 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lbx1P52955 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lbx1P52955 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.4□□□□□ -0.42
Lbx1P52955 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC12.4□□□□□ -0.42
Lbx1P52955 Gm4726-201ENSMUST00000135604 736 ntBASIC12.4□□□□□ -0.42
Lbx1P52955 Gm6019-201ENSMUST00000148369 736 ntBASIC12.4□□□□□ -0.42
Lbx1P52955 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.4□□□□□ -0.42
Lbx1P52955 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.4□□□□□ -0.42
Lbx1P52955 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.4□□□□□ -0.42
Lbx1P52955 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.4□□□□□ -0.42
Lbx1P52955 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lbx1P52955 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Lbx1P52955 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lbx1P52955 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.4□□□□□ -0.42
Lbx1P52955 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lbx1P52955 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lbx1P52955 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lbx1P52955 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.39□□□□□ -0.43
Lbx1P52955 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lbx1P52955 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lbx1P52955 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lbx1P52955 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lbx1P52955 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lbx1P52955 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lbx1P52955 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lbx1P52955 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lbx1P52955 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lbx1P52955 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lbx1P52955 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lbx1P52955 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.39□□□□□ -0.43
Lbx1P52955 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.39□□□□□ -0.43
Lbx1P52955 Gm25881-201ENSMUST00000157783 103 ntBASIC12.39□□□□□ -0.43
Lbx1P52955 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC12.39□□□□□ -0.43
Lbx1P52955 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lbx1P52955 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Lbx1P52955 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.39□□□□□ -0.43
Lbx1P52955 Gm44329-201ENSMUST00000197469 112 ntBASIC12.39□□□□□ -0.43
Lbx1P52955 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lbx1P52955 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.39□□□□□ -0.43
Lbx1P52955 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lbx1P52955 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lbx1P52955 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lbx1P52955 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lbx1P52955 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.39□□□□□ -0.43
Lbx1P52955 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.39□□□□□ -0.43
Lbx1P52955 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lbx1P52955 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lbx1P52955 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lbx1P52955 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lbx1P52955 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.39□□□□□ -0.43
Lbx1P52955 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lbx1P52955 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lbx1P52955 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms