Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pdx1P52946 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Pdx1P52946 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pdx1P52946 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.68□□□□□ -0.38
Pdx1P52946 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdx1P52946 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.67□□□□□ -0.38
Pdx1P52946 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pdx1P52946 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pdx1P52946 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.67□□□□□ -0.38
Pdx1P52946 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.67□□□□□ -0.38
Pdx1P52946 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.67□□□□□ -0.38
Pdx1P52946 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.67□□□□□ -0.38
Pdx1P52946 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pdx1P52946 Gm23931-201ENSMUST00000103842 109 ntBASIC12.67□□□□□ -0.38
Pdx1P52946 Gm14127-201ENSMUST00000117906 678 ntBASIC12.67□□□□□ -0.38
Pdx1P52946 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.67□□□□□ -0.38
Pdx1P52946 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Gm23363-201ENSMUST00000175024 79 ntBASIC12.67□□□□□ -0.38
Pdx1P52946 Mir7085-201ENSMUST00000184353 66 ntBASIC12.67□□□□□ -0.38
Pdx1P52946 Gm8099-201ENSMUST00000200510 742 ntBASIC12.67□□□□□ -0.38
Pdx1P52946 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Pdx1P52946 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.67□□□□□ -0.38
Pdx1P52946 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pdx1P52946 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pdx1P52946 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pdx1P52946 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Pdx1P52946 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdx1P52946 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Gm25261-201ENSMUST00000157416 134 ntBASIC12.66□□□□□ -0.38
Pdx1P52946 Gm25927-201ENSMUST00000175058 117 ntBASIC12.66□□□□□ -0.38
Pdx1P52946 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.66□□□□□ -0.38
Pdx1P52946 Gm18062-201ENSMUST00000208020 547 ntBASIC12.66□□□□□ -0.38
Pdx1P52946 Gm18055-201ENSMUST00000208254 547 ntBASIC12.66□□□□□ -0.38
Pdx1P52946 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Pdx1P52946 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.66□□□□□ -0.38
Pdx1P52946 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pdx1P52946 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdx1P52946 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.65□□□□□ -0.38
Pdx1P52946 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Pdx1P52946 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pdx1P52946 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdx1P52946 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Pdx1P52946 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms