Protein–RNA interactions for Protein: P50228

Cxcl5, C-X-C motif chemokine 5, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl5P50228 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.22□□□□□ -0.61
Cxcl5P50228 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cxcl5P50228 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Cxcl5P50228 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cxcl5P50228 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cxcl5P50228 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.22□□□□□ -0.61
Cxcl5P50228 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cxcl5P50228 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Cxcl5P50228 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cxcl5P50228 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.22□□□□□ -0.61
Cxcl5P50228 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.22□□□□□ -0.61
Cxcl5P50228 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.22□□□□□ -0.61
Cxcl5P50228 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.22□□□□□ -0.61
Cxcl5P50228 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cxcl5P50228 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Cxcl5P50228 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cxcl5P50228 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cxcl5P50228 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.21□□□□□ -0.61
Cxcl5P50228 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.21□□□□□ -0.61
Cxcl5P50228 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cxcl5P50228 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cxcl5P50228 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Cxcl5P50228 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.21□□□□□ -0.61
Cxcl5P50228 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.21□□□□□ -0.61
Cxcl5P50228 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Gm29667-201ENSMUST00000190817 490 ntBASIC11.21□□□□□ -0.61
Cxcl5P50228 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.21□□□□□ -0.61
Cxcl5P50228 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.21□□□□□ -0.61
Cxcl5P50228 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.21□□□□□ -0.61
Cxcl5P50228 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.21□□□□□ -0.61
Cxcl5P50228 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.21□□□□□ -0.61
Cxcl5P50228 Gm9797-201ENSMUST00000052902 613 ntBASIC11.21□□□□□ -0.61
Cxcl5P50228 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cxcl5P50228 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl5P50228 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.21□□□□□ -0.62
Cxcl5P50228 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl5P50228 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl5P50228 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl5P50228 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl5P50228 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl5P50228 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl5P50228 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.21□□□□□ -0.62
Cxcl5P50228 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cxcl5P50228 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl5P50228 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl5P50228 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl5P50228 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl5P50228 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.2□□□□□ -0.62
Cxcl5P50228 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl5P50228 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl5P50228 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl5P50228 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl5P50228 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Cxcl5P50228 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cxcl5P50228 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl5P50228 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl5P50228 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl5P50228 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl5P50228 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cxcl5P50228 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms