Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.64□□□□□ -0.71
Nkx2-1P50220 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.64□□□□□ -0.71
Nkx2-1P50220 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.64□□□□□ -0.71
Nkx2-1P50220 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-1P50220 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.63□□□□□ -0.71
Nkx2-1P50220 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Gm38144-201ENSMUST00000192790 465 ntBASIC10.63□□□□□ -0.71
Nkx2-1P50220 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Gm44872-201ENSMUST00000207864 420 ntBASIC10.63□□□□□ -0.71
Nkx2-1P50220 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.63□□□□□ -0.71
Nkx2-1P50220 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.63□□□□□ -0.71
Nkx2-1P50220 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.63□□□□□ -0.71
Nkx2-1P50220 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Nkx2-1P50220 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.62□□□□□ -0.71
Nkx2-1P50220 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.62□□□□□ -0.71
Nkx2-1P50220 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Nkx2-1P50220 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms